This is an interesting - and long - thread, which finally inspired me to comment.
Coming from (the competitive side of) soaring I learned quite a bit about aerodynamics as it is the only aspect of design defining the performance of a glider. Having a background in experimental physics helps me to reconcile theoretical concepts with empirical data.
As has been pointed out flap gap seals would be - in theory - detrimental to the effect of Fowler flaps as those flaps need the airflow through the gap to improve the slow flight/STOL characteristics of the wing.
Why do Fowler flaps - in some cases - still work with the gap seals installed?
a) because they probably don’t seal well.
High performance gliders with camber-changing flaps use gap seals on all control surfaces. A wide Teflon tape bonds to flap and wing, inhibiting any flow through the gap without affecting flap deflection, and pieces of closed cell foam seal both (spanwise) ends of the flaps against the wing.
In addition we use thin Mylar foil to cover both the top and bottom slits between wing and flap to not disturb the laminar flow which in modern airfoils extends to more than 90% of chord (into the flap in some cases).
Those are true gap seals, no cross flow!
A gap seal like this on a 70+ year non-laminar airfoil would - in general - improve performance somewhat in 0º (perhaps 10º) flap settings.
A bolted - or riveted - on strip of metal is not going to seal anywhere close to that.
b) because no two wings are the same.
60+ year old airplanes have dinged wings, repaired and adjusted in any which way, adjusted flap hinges etc. etc., which generate their particular flow regimes which could affect flight charactersitics in specific/extrem situations.
Add the difference in airflow imposed by a Horton, a Sportsman STOL kit - basically modified airfoils - and you end up with a rather individual wing which obviously defies generalisation as far as its performance under very special circumstances (eg. very low airspeed, high AoA, etc…) is concerned.
My conclusion: if the wing has gap seals and flies the way you like it - leave them on.
if there are no gap seals I wouldn’t put them on and expect better slow flight performance. They might just work as intended and stop the gap flow which the Fowlers need.
Disclosure: I have a Sportsman and VG’s on my 170B and they perform the way I expect/understand them to. No gap seals ever.